close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00284ABC transporter. (292 aa)    
Predicted Functional Partners:
BL00283
Putative transcriptional regulator, GntR family.
 
    0.952
BL00285
Hypothetical protein.
 
     0.941
BL02724
Conserved hypothetical protein; Putative transcriptional regulator.
 
    0.795
ytrA
Transcriptional regulator YtrA.
 
    0.622
BL02722
Hypothetical protein.
 
     0.616
BL05021
Conserved hypothetical protein.
  
  0.584
ycbO
Conserved hypothetical protein YcbO.
  
  0.577
lanI
Lantibiotic immunity protein.
   
  0.555
ydbK
Probable ABC transport system permease protein YdbK.
   
  0.555
yhcI
Putative permease YhcI.
   
  0.555
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.