STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00297Conserved hypothetical protein. (345 aa)    
Predicted Functional Partners:
manR
Transcriptional regulator.
    
  0.745
BL01774
Transcriptional regulator; BL01774 similar to mtlR from Bacillus subtilis.
    
  0.745
mtlR
Transcriptional regulator MtlR; BL02816 similar to mtlR from Bacillus subtilis, name change PiRa.
    
  0.745
licR
Transcriptional regulator.
    
  0.745
BL01776
Putative sugar phosphotransferase system protein.
  
 
 0.478
dhbF
DhbF.
 
  
 0.466
hxlA
3-hexulose-6-phosphate synthase HxlA.
    
 0.459
BL00298
PTS phosophotransferase.
       0.444
BL00296
Hypothetical protein.
       0.436
BL01775
Putative sugar phosphotransferase.
  
 
 0.424
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.