STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yslBConserved protein YslB. (147 aa)    
Predicted Functional Partners:
yclK
Two-component sensor histidine kinase YclK.
    
  0.736
yerH
YerH.
  
     0.713
ypiA
TPR-repeat containing conserved hypothetical protein.
  
   
 0.705
ribT
Reductase.
  
     0.673
ytxK
Putative RNA methylase YtxK.
  
     0.652
yycI
Putative extracytoplasmic proein YycI.
  
     0.643
yjbF
Conserved protein YjbF.
  
     0.628
swrB
Motility/swarming protein SwrB.
  
     0.619
yhcY
ATP-binding region protein.
    
  0.596
yfnI
Putative sulfatase; Belongs to the LTA synthase family.
  
     0.572
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.