Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL01931 | araN | BL01931 | BL00348 | Binding-protein-dependent transport systems inner membrane component. | Sugar-binding protein. | 0.772 |
BL01931 | araP | BL01931 | BL00347 | Binding-protein-dependent transport systems inner membrane component. | Integral membrane protein. | 0.920 |
BL01931 | mdxG | BL01931 | BL00494 | Binding-protein-dependent transport systems inner membrane component. | MdxG - part of ABC transport system for maltodextrins, membrane spanning component. | 0.406 |
BL01931 | msmX | BL01931 | BL02833 | Binding-protein-dependent transport systems inner membrane component. | Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.970 |
BL02682 | araN | BL02682 | BL00348 | Binding-protein-dependent transport systems inner membrane component. | Sugar-binding protein. | 0.801 |
BL02682 | araP | BL02682 | BL00347 | Binding-protein-dependent transport systems inner membrane component. | Integral membrane protein. | 0.920 |
BL02682 | msmX | BL02682 | BL02833 | Binding-protein-dependent transport systems inner membrane component. | Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.971 |
araN | BL01931 | BL00348 | BL01931 | Sugar-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.772 |
araN | BL02682 | BL00348 | BL02682 | Sugar-binding protein. | Binding-protein-dependent transport systems inner membrane component. | 0.801 |
araN | araP | BL00348 | BL00347 | Sugar-binding protein. | Integral membrane protein. | 0.989 |
araN | araQ | BL00348 | BL00346 | Sugar-binding protein. | Integral membrane protein. | 0.998 |
araN | lplC | BL00348 | BL03776 | Sugar-binding protein. | Transmembrane lipoprotein. | 0.818 |
araN | msmX | BL00348 | BL02833 | Sugar-binding protein. | Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.901 |
araN | yesQ | BL00348 | BL03792 | Sugar-binding protein. | Probable transporter permease protein YesQ. | 0.862 |
araN | ytcP | BL00348 | BL00021 | Sugar-binding protein. | Putative multiple sugar transport system permease protein YtcP. | 0.816 |
araN | yvfM | BL00348 | BL00265 | Sugar-binding protein. | Binding-protein-dependent transport system, inner membrane component protein. | 0.425 |
araP | BL01931 | BL00347 | BL01931 | Integral membrane protein. | Binding-protein-dependent transport systems inner membrane component. | 0.920 |
araP | BL02682 | BL00347 | BL02682 | Integral membrane protein. | Binding-protein-dependent transport systems inner membrane component. | 0.920 |
araP | araN | BL00347 | BL00348 | Integral membrane protein. | Sugar-binding protein. | 0.989 |
araP | araQ | BL00347 | BL00346 | Integral membrane protein. | Integral membrane protein. | 0.992 |
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