STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
araBL-ribulokinase. (552 aa)    
Predicted Functional Partners:
araD
L-ribulose-5-phosphate 4-epimerase.
 
 
 0.999
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.998
araA2
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
 
 0.994
BL01183
L-ribulose-5-phosphate 4-epimerase.
 
 
 0.987
araM
AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family.
 
  
 0.954
rpe
Ribulose-5-phosphate 3-epimerase Rpe; Belongs to the ribulose-phosphate 3-epimerase family.
 
   
  0.906
araN
Sugar-binding protein.
  
    0.869
yulC
Putative Carbohydrate kinase YulC.
 
  
 0.839
ywlF
Ribose/galactose isomerase.
    
  0.810
kdgK
2-keto-3-deoxygluconate kinase.
     
 0.807
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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