Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BL01183 | araA | BL01183 | BL00352 | L-ribulose-5-phosphate 4-epimerase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.890 |
BL01183 | araA2 | BL01183 | BL01182 | L-ribulose-5-phosphate 4-epimerase. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.954 |
BL01183 | araB | BL01183 | BL00351 | L-ribulose-5-phosphate 4-epimerase. | L-ribulokinase. | 0.939 |
BL01183 | araD | BL01183 | BL00350 | L-ribulose-5-phosphate 4-epimerase. | L-ribulose-5-phosphate 4-epimerase. | 0.408 |
BL01183 | araM | BL01183 | BL00349 | L-ribulose-5-phosphate 4-epimerase. | AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family. | 0.496 |
BL01183 | yuxG | BL01183 | BL00815 | L-ribulose-5-phosphate 4-epimerase. | Putative oxidoreductase YuxG. | 0.794 |
abfA | araA | BL00345 | BL00352 | Glycoside Hydrolase Family 51. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.855 |
abfA | araA2 | BL00345 | BL01182 | Glycoside Hydrolase Family 51. | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | 0.757 |
abfA | araB | BL00345 | BL00351 | Glycoside Hydrolase Family 51. | L-ribulokinase. | 0.730 |
abfA | araD | BL00345 | BL00350 | Glycoside Hydrolase Family 51. | L-ribulose-5-phosphate 4-epimerase. | 0.668 |
abfA | araM | BL00345 | BL00349 | Glycoside Hydrolase Family 51. | AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family. | 0.806 |
abfA | araN | BL00345 | BL00348 | Glycoside Hydrolase Family 51. | Sugar-binding protein. | 0.947 |
abfA | araP | BL00345 | BL00347 | Glycoside Hydrolase Family 51. | Integral membrane protein. | 0.885 |
araA | BL01183 | BL00352 | BL01183 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase. | 0.890 |
araA | abfA | BL00352 | BL00345 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Glycoside Hydrolase Family 51. | 0.855 |
araA | araB | BL00352 | BL00351 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulokinase. | 0.994 |
araA | araD | BL00352 | BL00350 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | L-ribulose-5-phosphate 4-epimerase. | 0.986 |
araA | araM | BL00352 | BL00349 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family. | 0.679 |
araA | araN | BL00352 | BL00348 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Sugar-binding protein. | 0.660 |
araA | araP | BL00352 | BL00347 | L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. | Integral membrane protein. | 0.535 |
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