STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytpIConserved membrane protein YtpI. (100 aa)    
Predicted Functional Partners:
ypiF
Hypothetical protein.
  
     0.773
ctaF
Cytochrome caa3 oxidase (subunit IV).
  
    0.769
yuiB
Conserved membrane protein YuiB.
  
     0.762
kbaA
kinB signaling pathway activation protein KbaA; Involved in the activation of the KinB signaling pathway of sporulation.
  
     0.761
ylbA
Hypothetical protein.
  
     0.760
ygzB
Hypothetical protein.
  
     0.752
ylaH
Hypothetical protein.
  
     0.750
cccA
Cytochrome c550.
  
     0.742
BL02789
Hypothetical protein.
  
     0.740
yqgY
Conserved protein YqgY.
  
     0.737
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.