STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lytSTwo-component sensor histidine kinase. (594 aa)    
Predicted Functional Partners:
lytT
Two-component response regulator.
 
 0.994
yesN
Two-component response regulator YesN.
 
 
 0.840
BL00122
Two-component response regulator; BL00122 similar to lytT from Bacillus subtilis.
 
  
  0.789
yesM
Two-component sensor histidine kinase YesM.
 
  
 
0.636
BL01744
Putative Histidine kinase.
 
  
 
0.617
lrgA
LrgA family.
 
   
 0.606
cheV
CheV.
     
 0.511
spoIIE
Serine phosphatase.
      
 0.503
ywpD
Two-component sensor histidine kinase.
 
 
0.501
BL00381
Hypothetical protein.
       0.470
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.