STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytxCConserved protein YtxC. (280 aa)    
Predicted Functional Partners:
yhaI
Conserved hypothetical protein YhaI.
  
     0.721
ylbD
Hypothetical protein.
  
     0.708
spoIIIAF
SpoIIIAF.
  
     0.707
yutH
Conserved protein YutH.
  
     0.700
BL02795
Hypothetical protein.
  
     0.691
ytxB
Conserved membrane protein YtxB.
     
 0.677
yhaL
Conserved hypothetical protein YhaL.
  
     0.674
yqfC
Conserved hypothetical protein YqfC.
  
     0.673
ftsL
Cell-division protein; Essential cell division protein; Belongs to the FtsL family.
  
     0.671
ytzH
YtzH.
  
     0.664
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.