STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL00475Putative peptidase; Belongs to the peptidase S51 family. (221 aa)    
Predicted Functional Partners:
ytcD
Possible transcriptional regulator YtcD.
       0.714
BL01922
Hypothetical protein.
  
     0.644
BL00693
Putative glycosyl transferase Family 4.
  
     0.539
BL02887
Putative aminoacid decarboxylase.
  
     0.501
ytbD
PTS system protein YtbD.
       0.484
yunG
YunG.
  
     0.458
BL00121
LPXTG-motif containing, cell wall anchor domain protein.
  
     0.453
ytbE
Aldo/keto reductase YtbE.
       0.434
BL02012
Hypothetical protein.
  
     0.433
BL01668
Hypothetical protein.
  
     0.430
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.