STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ywaEProbable transcriptional regulator YwaE; MarR family. (168 aa)    
Predicted Functional Partners:
bglP
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
   
 
 0.738
BL01947
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
   
 
 0.738
BL02334
Phosphotransferase system (PTS) beta-glucoside-specific enzyme IIBCA component.
   
 
 0.738
ptsG
Phosphotransferase system (PTS) glucose-specific enzyme IICBA component.
   
 
 0.738
tyrZ
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.
     
 0.490
BL00481
Hypothetical protein.
       0.488
BL00482
Hypothetical protein.
       0.488
ysmB
Probable transcriptional regulator YsmB.
  
   
 0.467
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.