STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pgcMBeta-phosphoglucomutase and glucose-1-phosphate phosphodismutase. (226 aa)    
Predicted Functional Partners:
yvdK
Glycoside Hydrolase Family 65, YvdK; Maltose phosphorylase.
 
 0.999
yvdJ
Conserved membrane protein YvdJ.
  
  
 0.969
yvdF
Glycoside Hydrolase Family 13 YvdF; Putative neopullulanase.
 
  
 0.940
malL
Glycoside Hydrolase Family 13, MalL; Similar to oligo-1,4-1,6-alpha-glucosidase (sucrase-maltase-isomaltase).
 
  
 0.932
mdxF
Maltodextrin transport system permease protein MdxF.
 
    0.924
mdxG
MdxG - part of ABC transport system for maltodextrins, membrane spanning component.
  
  
 0.916
mdxE
MdxE is substrate binding part of the maltodextrin ABC transport system.
  
    0.880
yvdE
Probable transcriptional regulator (LacI family).
 
   
 0.644
msmX
Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 0.498
glmM
Putative Phosphoglucosamine mutase GlmM; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
    
 
 0.459
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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