STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvdKGlycoside Hydrolase Family 65, YvdK; Maltose phosphorylase. (760 aa)    
Predicted Functional Partners:
pgcM
Beta-phosphoglucomutase and glucose-1-phosphate phosphodismutase.
 
 0.998
malL
Glycoside Hydrolase Family 13, MalL; Similar to oligo-1,4-1,6-alpha-glucosidase (sucrase-maltase-isomaltase).
 
 
 0.967
yvdF
Glycoside Hydrolase Family 13 YvdF; Putative neopullulanase.
 
 
 0.956
yvdJ
Conserved membrane protein YvdJ.
 
  
 0.931
mdxG
MdxG - part of ABC transport system for maltodextrins, membrane spanning component.
  
  
 0.868
mdxF
Maltodextrin transport system permease protein MdxF.
 
    0.866
mdxE
MdxE is substrate binding part of the maltodextrin ABC transport system.
 
  
 0.860
yhcW
HAD-superfamily hydrolase YhcW.
 
 
 0.750
glgB
Glycoside Hydrolase Family 13; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.682
amyL
Alpha amylase, Glycoside Hydrolase Family 13; BL00499 similar to treA from Bacillus subtilis.
  
 
 0.681
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.