STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdxEMdxE is substrate binding part of the maltodextrin ABC transport system. (417 aa)    
Predicted Functional Partners:
mdxG
MdxG - part of ABC transport system for maltodextrins, membrane spanning component.
 
 0.997
mdxF
Maltodextrin transport system permease protein MdxF.
 
 0.991
yvfM
Binding-protein-dependent transport system, inner membrane component protein.
 
 0.989
msmX
Multiple sugar-binding transport ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.980
yvfL
Binding-protein-dependent transport systems inner membrane component.
 
 0.970
yvdJ
Conserved membrane protein YvdJ.
 
  
 0.968
yvdF
Glycoside Hydrolase Family 13 YvdF; Putative neopullulanase.
 
  
 0.928
yvdK
Glycoside Hydrolase Family 65, YvdK; Maltose phosphorylase.
 
  
 0.860
yurN
Binding-protein-dependent transport systems inner membrane component.
 
 0.838
BL02683
Binding-protein-dependent transport systems inner membrane component.
 
 0.834
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: medium (50%) [HD]