Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| holB | tmk | BL00541 | BL02509 | DNA polymerase III (delta' subunit). | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.930 |
| holB | yaaO | BL00541 | BL02508 | DNA polymerase III (delta' subunit). | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | 0.679 |
| holB | yaaQ | BL00541 | BL02510 | DNA polymerase III (delta' subunit). | YaaQ. | 0.830 |
| holB | yaaR | BL00541 | BL05002 | DNA polymerase III (delta' subunit). | Conserved hypothetical protein YaaR. | 0.886 |
| holB | yaaT | BL00541 | BL00539 | DNA polymerase III (delta' subunit). | Putative signal peptidase II YaaT; Involved in the transduction of signals to the phosphorelay for initiation of sporulation, similar to signal peptidase II, contains PSP1_C terminal domain. | 0.842 |
| holB | yabA | BL00541 | BL00538 | DNA polymerase III (delta' subunit). | DnaA and DnaN interacting protein containing domain DUF972- YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.856 |
| holB | yabB | BL00541 | BL00537 | DNA polymerase III (delta' subunit). | Conserved hypothetical protein containing SAM (and some other nucleotide) binding motif YabB. | 0.741 |
| holB | yabC | BL00541 | BL00535 | DNA polymerase III (delta' subunit). | Putative methyltransferase YabC containing domain UPF0011; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.667 |
| holB | yazA | BL00541 | BL00536 | DNA polymerase III (delta' subunit). | Putative Excinuclease ABC, C subunit, N-terminal YazA; Belongs to the UPF0213 family. | 0.624 |
| tmk | holB | BL02509 | BL00541 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | DNA polymerase III (delta' subunit). | 0.930 |
| tmk | yaaO | BL02509 | BL02508 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | 0.901 |
| tmk | yaaQ | BL02509 | BL02510 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | YaaQ. | 0.686 |
| tmk | yaaR | BL02509 | BL05002 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Conserved hypothetical protein YaaR. | 0.630 |
| tmk | yaaT | BL02509 | BL00539 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Putative signal peptidase II YaaT; Involved in the transduction of signals to the phosphorelay for initiation of sporulation, similar to signal peptidase II, contains PSP1_C terminal domain. | 0.605 |
| tmk | yabA | BL02509 | BL00538 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | DnaA and DnaN interacting protein containing domain DUF972- YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family. | 0.693 |
| tmk | yabB | BL02509 | BL00537 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Conserved hypothetical protein containing SAM (and some other nucleotide) binding motif YabB. | 0.502 |
| tmk | yabC | BL02509 | BL00535 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Putative methyltransferase YabC containing domain UPF0011; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA. | 0.484 |
| tmk | yazA | BL02509 | BL00536 | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | Putative Excinuclease ABC, C subunit, N-terminal YazA; Belongs to the UPF0213 family. | 0.477 |
| yaaO | holB | BL02508 | BL00541 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | DNA polymerase III (delta' subunit). | 0.679 |
| yaaO | tmk | BL02508 | BL02509 | Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase. | Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.901 |
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