STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xlyBN-acetylmuramoyl-L-alanine amidase. (311 aa)    
Predicted Functional Partners:
BL00543
Hypothetical protein.
       0.723
xtmA
Putative phage terminase (small subunit).
   
    0.653
xtmB
Putative phage terminase (large subunit).
 
    0.640
xkdO
Hypothetical phage related protein.
  
    0.635
xkdQ
Hypothetical phage related protein.
  
    0.618
bhlA
Holin-like protein.
  
    0.605
xkdG
Phage related protein.
   
    0.561
BL03805
Phage related protein.
   
  
 0.524
xkdF
Phage related protein.
   
    0.516
xkdW
Phage related protein.
  
    0.515
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.