Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL02929 | comK | BL02929 | BL01090 | Hypothetical protein. | Competence transcription factor ComK. | 0.426 |
| BL02929 | secDF | BL02929 | BL01131 | Hypothetical protein. | Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.541 |
| BL02929 | yozC | BL02929 | BL00580 | Hypothetical protein. | Conserved protein YozC. | 0.639 |
| BL02929 | ytkD | BL02929 | BL03288 | Hypothetical protein. | Putative hydrolase YtkD; Belongs to the Nudix hydrolase family. | 0.415 |
| BL02929 | ytpQ | BL02929 | BL00047 | Hypothetical protein. | Conserved protein YtpQ; Belongs to the UPF0354 family. | 0.645 |
| BL02929 | ytxG | BL02929 | BL00052 | Hypothetical protein. | Conserved protein YtxG. | 0.594 |
| comK | BL02929 | BL01090 | BL02929 | Competence transcription factor ComK. | Hypothetical protein. | 0.426 |
| comK | secDF | BL01090 | BL01131 | Competence transcription factor ComK. | Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.473 |
| comK | yhdB | BL01090 | BL02859 | Competence transcription factor ComK. | Conserved hypothetical protein YhdB. | 0.516 |
| comK | yjbH | BL01090 | BL03343 | Competence transcription factor ComK. | Conserved protein YjbH; Belongs to the UPF0413 family. | 0.689 |
| comK | ykyB | BL01090 | BL03649 | Competence transcription factor ComK. | Hypothetical protein. | 0.464 |
| comK | yozC | BL01090 | BL00580 | Competence transcription factor ComK. | Conserved protein YozC. | 0.580 |
| comK | ytkD | BL01090 | BL03288 | Competence transcription factor ComK. | Putative hydrolase YtkD; Belongs to the Nudix hydrolase family. | 0.716 |
| comK | ytlQ | BL01090 | BL00038 | Competence transcription factor ComK. | Conserved protein YtlQ. | 0.471 |
| comK | ytpQ | BL01090 | BL00047 | Competence transcription factor ComK. | Conserved protein YtpQ; Belongs to the UPF0354 family. | 0.760 |
| comK | ytxG | BL01090 | BL00052 | Competence transcription factor ComK. | Conserved protein YtxG. | 0.551 |
| secDF | BL02929 | BL01131 | BL02929 | Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Hypothetical protein. | 0.541 |
| secDF | comK | BL01131 | BL01090 | Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Competence transcription factor ComK. | 0.473 |
| secDF | yozC | BL01131 | BL00580 | Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Conserved protein YozC. | 0.608 |
| secDF | ytpQ | BL01131 | BL00047 | Protein-export membrane protein SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Conserved protein YtpQ; Belongs to the UPF0354 family. | 0.578 |
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