STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sqhCSqhC. (629 aa)    
Predicted Functional Partners:
sodF
Superoxide dismutase.
  
    0.862
dhbF
DhbF.
      
 0.721
cypE
Cytochrome P450 / NADPH-ferrihemoprotein reductase; In the N-terminal section; belongs to the cytochrome P450 family.
    
 0.716
yhjG
Putative Flavoprotein monooxygenase.
   
 
 0.675
BL03911
4-hydroxybenzoate 3-monooxygenase.
   
 
 0.675
ysfC
Glycolate oxidase subunit GlcD.
   
 
 0.659
ytpB
Conserved protein YtpB.
      
 0.655
cypX
Cytochrome P450-like enzyme CypX.
  
 
 0.643
hisB
Imidazoleglycerol-phosphate dehydratase.
      
 0.608
bioI
Cytochrome P450 enzyme.
    
 0.597
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.