STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00594Hypothetical protein. (433 aa)    
Predicted Functional Partners:
BL00598
Putative alanine racemase.
 
  
 0.949
BL00595
Zin-ion binding putative hydrolase.
 
    0.936
BL00597
Putative phosphopentomutase; BL00597 similar to drm from Bacillus subtilis, phosphodeoxyribomutase.
 
    0.934
BL00596
Hypothetical protein.
 
     0.926
BL00593
Hypothetical protein.
 
     0.893
BL00591
Hypothetical protein.
 
     0.864
BL00592
Hypothetical protein.
       0.536
nagB-2
N-acetylglucosamine-6-phosphate isomerase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.
       0.438
hsdIA
Type I Restriction Modification system protein HsdIA.
  
     0.420
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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