Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cysG | gsaB | BL02286 | BL03060 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | Glutamate-1-semialdehyde aminotransferase. | 0.675 |
| cysG | hemA | BL02286 | BL00623 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.755 |
| cysG | hemB | BL02286 | BL00627 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | Delta-aminolevulinic acid dehydratase (porphobilinogen synthase); Belongs to the ALAD family. | 0.870 |
| cysG | hemC | BL02286 | BL00625 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | Porphobilinogen deaminase (hydroxymethylbilane synthase); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.994 |
| cysG | hemD | BL02286 | BL00626 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | Uroporphyrinogen III cosynthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.982 |
| cysG | hemE | BL02286 | BL01072 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.644 |
| cysG | hemL | BL02286 | BL00628 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | Glutamate-1-semialdehyde 2,1-aminotransferase. | 0.712 |
| cysG | nasF | BL02286 | BL01771 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | uroporphyrin-III C-methyltransferase. | 0.797 |
| cysG | sirA | BL02286 | BL02289 | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | Siroheme synthase SirA. | 0.996 |
| gsaB | cysG | BL03060 | BL02286 | Glutamate-1-semialdehyde aminotransferase. | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | 0.675 |
| gsaB | hemA | BL03060 | BL00623 | Glutamate-1-semialdehyde aminotransferase. | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.969 |
| gsaB | hemB | BL03060 | BL00627 | Glutamate-1-semialdehyde aminotransferase. | Delta-aminolevulinic acid dehydratase (porphobilinogen synthase); Belongs to the ALAD family. | 0.966 |
| gsaB | hemC | BL03060 | BL00625 | Glutamate-1-semialdehyde aminotransferase. | Porphobilinogen deaminase (hydroxymethylbilane synthase); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.901 |
| gsaB | hemD | BL03060 | BL00626 | Glutamate-1-semialdehyde aminotransferase. | Uroporphyrinogen III cosynthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.793 |
| gsaB | hemE | BL03060 | BL01072 | Glutamate-1-semialdehyde aminotransferase. | Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.475 |
| gsaB | hemL | BL03060 | BL00628 | Glutamate-1-semialdehyde aminotransferase. | Glutamate-1-semialdehyde 2,1-aminotransferase. | 0.564 |
| gsaB | nasF | BL03060 | BL01771 | Glutamate-1-semialdehyde aminotransferase. | uroporphyrin-III C-methyltransferase. | 0.930 |
| gsaB | sirA | BL03060 | BL02289 | Glutamate-1-semialdehyde aminotransferase. | Siroheme synthase SirA. | 0.717 |
| hemA | cysG | BL00623 | BL02286 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Uroporphyrin-III C-methyltransferase, C-terminal; Belongs to the precorrin methyltransferase family. | 0.755 |
| hemA | gsaB | BL00623 | BL03060 | glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Glutamate-1-semialdehyde aminotransferase. | 0.969 |
page 1 of 6