STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resDTwo-component response regulator ResD. (240 aa)    
Predicted Functional Partners:
resE
Two-component sensor histidine kinase ResE.
 0.997
BL03174
Two-component sensor histidine kinase.
 0.987
yclK
Two-component sensor histidine kinase YclK.
 0.973
BL01322
Two-component sensor histidine kinase.
 
  0.888
phoR
Two-component sensor histidine kinase.
 0.884
cheV
CheV.
  
 0.858
spaK
Two-component sensor histidine kinase SpaK; Similar to Subtilin biosynthesis sensor protein spaK in Bacillus subtilis.
  
  0.854
yclK-2
Histidine kinase, homodimeric YclK.
  0.843
cssS
Two-component sensor histidine kinase.
 
  0.834
yycG
Two-component sensor histidine kinase.
 0.824
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.