STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
resCResC. (391 aa)    
Predicted Functional Partners:
resB
ResB.
 
  
 0.985
resA
Essential cytochrome c biogenesis protein; Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached.
 
  
 0.899
nasF
uroporphyrin-III C-methyltransferase.
  
    0.801
qcrA
Menaquinol:cytochrome c oxidoreductase (iron-sulfur subunit).
 
    0.758
qcrB
Menaquinol:cytochrome c oxidoreductase (cytochrome b subunit).
  
  
 0.746
yqzF
Conserved protein YqzF.
  
     0.746
resE
Two-component sensor histidine kinase ResE.
 
  
 0.739
hemX
Membrane-bound protein.
  
     0.736
ytkA
Conserved protein YtkA.
  
    0.735
ygzB
Hypothetical protein.
  
     0.732
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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