STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yokLPutative N-acetyltransferase. (183 aa)    
Predicted Functional Partners:
bcsA
Naringenin-chalcone synthase.
       0.757
ypbQ
Isoprenylcysteine carboxyl methyltransferase.
       0.699
xpt
Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.
       0.582
pbuX
Xanthine permease.
       0.580
BL05251
GCN5-related N-acetyltransferase.
  
     0.554
BL03216
GCN5-related N-acetyltransferase.
  
     0.538
BL00579
GCN5-related N-acetyltransferase.
  
     0.506
BL05231
Hypothetical protein.
       0.495
BL01340
N-acetyltransferase.
  
     0.480
ynaD
GCN5-related N-acetyltransferase; Acetyltransferase (GNAT) family.
  
     0.471
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.