STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00684Conserved membrane protein. (214 aa)    
Predicted Functional Partners:
cinA
Competence-damage inducible protein; Belongs to the CinA family.
    
 0.784
BL00685
Sporulation related protein Stage V; Belongs to the SEDS family.
       0.732
BL05056
Cell-division protein; Belongs to the SEDS family.
       0.732
BL05021
Conserved hypothetical protein.
  
     0.705
ycbO
Conserved hypothetical protein YcbO.
  
     0.692
BL02722
Hypothetical protein.
  
     0.641
BL02012
Hypothetical protein.
 
     0.560
BL02887
Putative aminoacid decarboxylase.
  
     0.545
BL00578
Putative deaminase.
  
     0.537
ycbN
ABC transporter YcbN.
  
     0.515
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.