STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL00713Glycoside Hydrolase Family 28; Belongs to the glycosyl hydrolase 28 family. (436 aa)    
Predicted Functional Partners:
yteR
Unsaturated rhamnogalacturonyl hydrolase.
     0.965
yesT
Putative carbohydrate esterase, Family 12, YesT.
 
   0.963
BL03784
Putative carbohydrate esterase Family 12.
 
   0.953
yesY
Carbohydrate esterase, Family 12 YesY.
 
   0.948
BL00567
Carbohydrate Esterase Family 12, putative beta-tubulin.
 
   0.931
uxaB
Tagaturonate reductase (altronate oxidoreductase).
 
     0.867
uxaA
Altronate hydrolase.
 
   
 0.844
BL03022
Glycoside Hydrolase Family 43; Similar to xynB from Bacillus subtilis; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.839
BL00724
Carbohydrate Esterase Family 8 protein.
 
   
 0.837
yesR
Conserved protein YesR.
 
   
 0.836
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.