STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvrBPutative iron transport system permease protein YvrB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (354 aa)    
Predicted Functional Partners:
yvrC
Putative iron transport system substrate-binding protein YvrC.
 
 0.996
yvrA
Putative iron transport system ATP-binding protein YvrA.
 
 0.994
fhuC
Ferrichrome ABC transporter (ATP-binding protein).
 
 0.941
yusV
ABC transporter.
 
 0.937
BL00468
Periplasmic iron-binding protein.
 
  0.734
ykuO
Glycoside hydrolase.
   
    0.720
yxeB
Periplasmic binding protein YxeB.
 
  0.689
yfiY
ABC transport system substrate-binding protein.
 
  0.688
BL03470
Periplasmic binding protein,putative iron transporter.
 
  0.687
ybbB
Probable transcriptional regulator (AraC/XylS family).
  
 0.685
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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