STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvqKConserved protein YvqK; Belongs to the Cob(I)alamin adenosyltransferase family. (192 aa)    
Predicted Functional Partners:
metH
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase MetH; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
   
 0.645
hisC
Histidinol-phosphate aminotransferase and tyrosine/phenylalanine aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
 0.629
BL00743
Beta-ketoacyl-acyl carrier protein reductase.
  
    0.506
BL00724
Carbohydrate Esterase Family 8 protein.
       0.494
fhuC
Ferrichrome ABC transporter (ATP-binding protein).
  
 
  0.426
yvrA
Putative iron transport system ATP-binding protein YvrA.
  
 
  0.426
yusV
ABC transporter.
  
 
  0.426
nasF
uroporphyrin-III C-methyltransferase.
  
  
 0.425
yitJ
Homocysteine S-methyltransferase.
 
   
 0.424
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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