STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
liaIConserved membrane protein LiaI. (128 aa)    
Predicted Functional Partners:
liaH
Putative phage shock protein YvqH.
  
  
 0.999
liaF
Conserved protein LiaF.
  
  
 0.937
liaR
Two-component response regulator LiaR.
  
  
 0.862
liaS
Two-component sensor histidine kinase LiaS.
  
  
 0.823
pspA
Phage shock protein A homolog.
  
  
 0.775
liaG
Conserved protein LiaG.
  
  
 0.644
ydjH
Conserved membrane protein YdjH.
      
 0.613
ydjI
Conserved protein YdjI.
      
 0.609
ydjG
Conserved protein YdjG.
      
 0.597
BL02058
Two-component response regulator.
  
  
 0.513
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.