STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
liaFConserved protein LiaF. (243 aa)    
Predicted Functional Partners:
liaS
Two-component sensor histidine kinase LiaS.
 
  
 0.991
liaR
Two-component response regulator LiaR.
 
  
 0.981
liaG
Conserved protein LiaG.
 
  
 0.915
liaH
Putative phage shock protein YvqH.
  
  
 0.909
yvlB
Conserved hypothetical protein YvlB.
 
  
 0.830
liaI
Conserved membrane protein LiaI.
  
  
 0.801
BL02057
Two-component sensor histidine kinase.
 
  
 0.710
BL02058
Two-component response regulator.
 
  
 0.702
yhcY
ATP-binding region protein.
 
    0.690
ydfH
Histidine kinase YdfH.
 
    0.665
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.