STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yqjMNADH:flavin oxidoreductase/NADH oxidase; Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes; Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily. (339 aa)    
Predicted Functional Partners:
gltA
Glutamate synthase (large subunit).
    
 0.815
etfB
Electron transfer flavoprotein (beta subunit).
  
 
 0.759
narH
Nitrate reductase (beta subunit).
    
   0.633
etfA
Electron transfer flavoprotein (alpha subunit).
   
 
 0.624
adhA
NADP-dependent alcohol dehydrogenase.
 
  
 0.590
yqjN
Putative amino acid degradation protein.
       0.562
yqjL
YqjL.
  
  
 0.541
yisK
Fumarylacetoacetate (FAA) hydrolase YisK.
    
 0.533
BL02059
Putative oxidoreductase.
   
 
 0.528
sdhA
Succinate dehydrogenase (flavoprotein subunit).
   
 0.517
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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