STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BL00807Hypothetical protein. (168 aa)    
Predicted Functional Partners:
BL00808
Hypothetical protein.
       0.632
celB
Glycoside Hydrolase Family 48.
   
    0.618
BL00897
Spore germination protein.
  
     0.561
BL00900
Spore germination protein.
  
     0.556
BL00898
Spore germination protein.
  
     0.555
gerAB
Spore germination protein.
  
     0.488
seaA
Hypothetical protein; Involved in spore envelope assembly.
 
     0.458
yyaC
Conserved hypothetical protein containing domain DUF1256.
  
     0.440
BL03758
Hypothetical protein.
  
     0.436
yoaR
Conserved protein YoaR.
 
     0.432
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.