STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yulCPutative Carbohydrate kinase YulC. (493 aa)    
Predicted Functional Partners:
yuxG
Putative oxidoreductase YuxG.
 
 
 0.976
BL00813
Putative xylose isomerase.
 
  
 0.946
BL00814
Hypothetical protein.
 
     0.827
yulB
Probable transcriptional regulator YulB.
 
    0.655
mtnB
Putative Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). In the N-terminal section; belongs to the HAD-like hydrolase superfamily. MtnX family.
  
 
 0.577
araB
L-ribulokinase.
 
 
 0.557
rpe
Ribulose-5-phosphate 3-epimerase Rpe; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.555
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
  
 
 0.554
BL03053
Probable transcriptional regulator (AraC/XylS family).
 
 
 0.551
araD
L-ribulose-5-phosphate 4-epimerase.
  
 
 0.548
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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