STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00875Phage related protein. (193 aa)    
Predicted Functional Partners:
BL00876
Phage related protein.
  
    0.853
BL03502
Hypothetical phagelike protein.
 
     0.775
BL00874
Phage related protein.
       0.774
BL00881
Phage related putative head portal protein.
 
     0.774
BL03501
Hypothetical protein.
 
     0.770
ytkC
Conserved membrane protein YtkC.
 
    0.768
BL00882
Phage related, putative terminase large sub-unit.
 
     0.764
BL05345
Putative electron transporter.
 
    0.738
BL03507
Hypothetical phagelike protein.
 
    0.732
BL05138
Phage related protein.
 
    0.728
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.