STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lanTLantibiotic transport protein. (718 aa)    
Predicted Functional Partners:
lanM1
Lantibiotic modifying enzyme.
 
   
 0.917
BL03074
TPR-like, putative glycosyl transferase family 2 protein.
  
  
 0.905
yhbJ
Conserved protein YhbJ.
  
 
 0.848
yhbJ-2
Putative transporter YhbJ.
  
 
 0.848
lanP
Intracellular serine protease; Belongs to the peptidase S8 family.
  
    0.785
lanX
Conserved hypothetical protein.
       0.773
lanM2
Lantibiotic modifying enzyme.
 
   
 0.715
BL03073
Hypothetical protein.
  
  
 0.709
lanF
Lantibiotic immunity protein,ABC transporter.
 
    
0.602
BL03880
ABC transporter.
 
 
  
0.581
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.