STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lanFLantibiotic immunity protein,ABC transporter. (211 aa)    
Predicted Functional Partners:
lanG
Lantibiotic immunity protein, MFS type transporter.
     
 0.940
lanR
Transcriptional regulator.
     
 0.908
lanI
Lantibiotic immunity protein.
  
  0.895
lanH
Lantibiotic immunity protein,ABC transporter.
 
   
0.845
lanP
Intracellular serine protease; Belongs to the peptidase S8 family.
   
 
 0.774
lanY
LanY.
       0.773
lanE
Lantibiotic immunity protein.
       0.773
yvfR
ABC transporter.
 
     0.761
ybaE
ABC transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
  0.741
lanT
Lantibiotic transport protein.
 
  
0.724
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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