STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lanHLantibiotic immunity protein,ABC transporter. (300 aa)    
Predicted Functional Partners:
lanI
Lantibiotic immunity protein.
 
  0.941
lanG
Lantibiotic immunity protein, MFS type transporter.
     
 0.858
lanF
Lantibiotic immunity protein,ABC transporter.
 
   
0.845
lanR
Transcriptional regulator.
     
 0.844
lanY
LanY.
       0.773
lanE
Lantibiotic immunity protein.
       0.773
yhcI
Putative permease YhcI.
 
  0.758
lanM1
Lantibiotic modifying enzyme.
     
 0.726
ydbK
Probable ABC transport system permease protein YdbK.
 
  0.701
lanT
Lantibiotic transport protein.
 
  
0.674
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.