STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yfmJPutative oxidoreductase. (340 aa)    
Predicted Functional Partners:
BL00964
Hypothetical protein.
       0.627
ytbE
Aldo/keto reductase YtbE.
   
 
 0.502
yvgN
Putative 2,5-diketo-D-gluconic acid reductase YvgN.
   
 
 0.502
BL02693
Hypothetical protein; GroES-like.
 
 
 0.471
ywnB
YwnB.
   
  
 0.462
argG
Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
    
   0.458
yqiG
Putative NADH-dependent flavin oxidoreductase YqiG.
  
  
 0.436
ywrO
NAD(P)H dehydrogenase YwrO.
  
 
 0.419
yqjM
NADH:flavin oxidoreductase/NADH oxidase; Catalyzes the reduction of the double bond of an array of alpha,beta-unsaturated aldehydes and ketones. It also reduces the nitro group of nitroester and nitroaromatic compounds. It could have a role in detoxification processes; Belongs to the NADH:flavin oxidoreductase/NADH oxidase family. NamA subfamily.
  
  
 0.408
yflT
Conserved hypothetical protein YflT; General stress protein.
       0.401
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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