STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00967Phage related protein. (1172 aa)    
Predicted Functional Partners:
BL00969
Phage related protein.
 
 
 0.973
BL00968
Hypothetical protein.
  
   0.908
BL05130
Hypothetical protein.
       0.746
BL07026
Hypothetical protein; BLi01483.
       0.741
BL03514
Hypothetical phagelike protein.
  
   0.653
xhlA
XhlA.
  
    0.625
cwlC
N-acetylmuramoyl-L-alanine amidase.
  
 
 0.623
yrvJ
N-acetylmuramoyl-L-alanine amidase YrvJ.
  
 
  0.615
xhlB
Holin.
  
    0.605
BL03524
Glycoside Hydrolase Family 25.
  
  
 0.589
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.