STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL00969Phage related protein. (1020 aa)    
Predicted Functional Partners:
BL00967
Phage related protein.
 
 
 0.973
BL00968
Hypothetical protein.
  
   0.922
BL03515
Glycoside Hydrolase Family 73.
 
 
 0.863
ytkC
Conserved membrane protein YtkC.
 
    0.847
BL00870
Phage related protein.
 
 
 0.818
BL05130
Hypothetical protein.
       0.773
BL03514
Hypothetical phagelike protein.
 
   0.752
BL00983
Phage related protein.
 
    0.724
BL07026
Hypothetical protein; BLi01483.
       0.716
BL00713
Glycoside Hydrolase Family 28; Belongs to the glycosyl hydrolase 28 family.
  
   0.669
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.