STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsAABC transporter (ATP-binding protein). (246 aa)    
Predicted Functional Partners:
ecsB
ABC transporter (membrane protein).
 
  
 0.947
BL05094
Hypothetical protein.
       0.773
ecsC
EscC.
  
 
 0.743
lanI
Lantibiotic immunity protein.
  
  0.612
yhcI
Putative permease YhcI.
  
  0.608
BL01723
Multiple sugar-binding transport ATP-binding protein; BL01723 similar to msmX from Bacillus subtilis; Belongs to the ABC transporter superfamily.
 
  
 
0.591
lytC
N-acetylmuramoyl-L-alanine amidase (major autolysin) (CWBP49).
      
 0.589
spoIIGA
Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR.
      
 0.571
ydbK
Probable ABC transport system permease protein YdbK.
   
  0.555
BL03459
Hypothetical protein.
   
  0.555
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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