STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ecsBABC transporter (membrane protein). (407 aa)    
Predicted Functional Partners:
ecsA
ABC transporter (ATP-binding protein).
 
  
 0.947
ecsC
EscC.
  
  
 0.774
BL05094
Hypothetical protein.
       0.773
ytxK
Putative RNA methylase YtxK.
 
     0.681
yutD
Conserved protein YutD.
  
     0.673
ydcK
Conserved protein YdcK; Belongs to the SprT family.
  
     0.672
ypiA
TPR-repeat containing conserved hypothetical protein.
  
     0.653
yozE
Hypothetical protein; Belongs to the UPF0346 family.
  
     0.625
divIB
Cell-division initiation protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.
  
     0.620
ylbG
Conserved hypothetical protein.
  
     0.598
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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