STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
pbpFPenicillin-binding protein,putative glycosyl transferase family 51. (712 aa)    
Predicted Functional Partners:
ponA
Penicillin-binding proteins,Glycosyl Transferase Family 51.
  
  
 
0.918
dacF
Penicilin binding protein (putative D-alanyl-D-alanine carboxypeptidase); Belongs to the peptidase S11 family.
   
 
 0.916
dacA
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5); Belongs to the peptidase S11 family.
   
 
 0.911
yodJ
Putative carboxypeptidase.
     
 0.903
dacB
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*); Belongs to the peptidase S11 family.
   
 
 0.901
ypsB
Conserved hypothetical protein YpsB; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.
   
 
 0.824
cwlC
N-acetylmuramoyl-L-alanine amidase.
  
 
 
 0.786
BL05056
Cell-division protein; Belongs to the SEDS family.
  
 
 
 0.706
BL03883
Cell division protein; Belongs to the SEDS family.
  
 
 
 0.696
BL00685
Sporulation related protein Stage V; Belongs to the SEDS family.
  
 
 
 0.692
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.