STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01101Conserved hypothetical protein. (256 aa)    
Predicted Functional Partners:
BL01100
Conserved hypothetical protein.
 
   0.961
BL01099
Putative oxidoreductase.
 
   0.959
yjmC
Putative ureidoglycolate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.926
BL01096
Conserved hypothetical protein.
 
     0.914
BL01097
Putative Ureidoglycolate dehydrogenase; Belongs to the LDH2/MDH2 oxidoreductase family.
 
     0.891
BL01364
Putative transporter,membrane protein.
 
     0.853
BL01095
Putative allointase/hydantoinase/amidohydrolase protein.
 
     0.849
BL01102
Carbamate kinase; Belongs to the carbamate kinase family.
 
     0.845
BL01119
Transcriptional regulator.
 
     0.784
BL01093
Major facilitator superfamily, putative transporter.
  
     0.772
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.