Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BL03072 | apr | BL03072 | BL01111 | Hypothetical protein. | Apr; Belongs to the peptidase S8 family. | 0.472 |
| BL07035 | apr | BL07035 | BL01111 | Hypothetical protein; BLi02070. | Apr; Belongs to the peptidase S8 family. | 0.472 |
| apr | BL03072 | BL01111 | BL03072 | Apr; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.472 |
| apr | BL07035 | BL01111 | BL07035 | Apr; Belongs to the peptidase S8 family. | Hypothetical protein; BLi02070. | 0.472 |
| apr | cat | BL01111 | BL03127 | Apr; Belongs to the peptidase S8 family. | Antibiotic resistance protein, methyltransferase; This enzyme is an effector of chloramphenicol resistance in bacteria; Belongs to the chloramphenicol acetyltransferase family. | 0.432 |
| apr | lacA2 | BL01111 | BL01749 | Apr; Belongs to the peptidase S8 family. | Glycoside Hydrolase Family 42; BL01749 similar to lacA from Bacillus subtilis, named by MDT - PiRa. | 0.518 |
| apr | yerB | BL01111 | BL01493 | Apr; Belongs to the peptidase S8 family. | Conserved protein YerB. | 0.549 |
| apr | yesZ | BL01111 | BL03780 | Apr; Belongs to the peptidase S8 family. | Glycoside hydrolase, family 42; May play a role in the degradation of rhamnogalacturonan derived from plant cell walls. | 0.443 |
| apr | yhjA | BL01111 | BL05379 | Apr; Belongs to the peptidase S8 family. | Conserved hypothetical protein. | 0.472 |
| apr | ylyB | BL01111 | BL02270 | Apr; Belongs to the peptidase S8 family. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.510 |
| apr | yuaB | BL01111 | BL03904 | Apr; Belongs to the peptidase S8 family. | Conserved hypothetical protein yuaB. | 0.472 |
| apr | ywoF | BL01111 | BL01495 | Apr; Belongs to the peptidase S8 family. | Polysaccharide Lyase Family 9,YwoF. | 0.472 |
| cat | apr | BL03127 | BL01111 | Antibiotic resistance protein, methyltransferase; This enzyme is an effector of chloramphenicol resistance in bacteria; Belongs to the chloramphenicol acetyltransferase family. | Apr; Belongs to the peptidase S8 family. | 0.432 |
| lacA2 | apr | BL01749 | BL01111 | Glycoside Hydrolase Family 42; BL01749 similar to lacA from Bacillus subtilis, named by MDT - PiRa. | Apr; Belongs to the peptidase S8 family. | 0.518 |
| lacA2 | yesZ | BL01749 | BL03780 | Glycoside Hydrolase Family 42; BL01749 similar to lacA from Bacillus subtilis, named by MDT - PiRa. | Glycoside hydrolase, family 42; May play a role in the degradation of rhamnogalacturonan derived from plant cell walls. | 0.728 |
| lacA2 | ylyB | BL01749 | BL02270 | Glycoside Hydrolase Family 42; BL01749 similar to lacA from Bacillus subtilis, named by MDT - PiRa. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.613 |
| yerB | apr | BL01493 | BL01111 | Conserved protein YerB. | Apr; Belongs to the peptidase S8 family. | 0.549 |
| yesZ | apr | BL03780 | BL01111 | Glycoside hydrolase, family 42; May play a role in the degradation of rhamnogalacturonan derived from plant cell walls. | Apr; Belongs to the peptidase S8 family. | 0.443 |
| yesZ | lacA2 | BL03780 | BL01749 | Glycoside hydrolase, family 42; May play a role in the degradation of rhamnogalacturonan derived from plant cell walls. | Glycoside Hydrolase Family 42; BL01749 similar to lacA from Bacillus subtilis, named by MDT - PiRa. | 0.728 |
| yesZ | ylyB | BL03780 | BL02270 | Glycoside hydrolase, family 42; May play a role in the degradation of rhamnogalacturonan derived from plant cell walls. | Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family. | 0.613 |
page 1 of 2