STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yhfWPutative oxidoreductase YhfW. (509 aa)    
Predicted Functional Partners:
ctaC
Cytochrome caa3 oxidase (subunit II); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
 0.999
cccB
Cytochrome c551.
  
 0.981
cccA
Cytochrome c550.
  
 0.981
sdhA
Succinate dehydrogenase (flavoprotein subunit).
  
 0.970
ctaE
Cytochrome caa3 oxidase (subunit III).
  
 
 0.942
qoxC
Cytochrome aa3 quinol oxidase (subunit III).
  
 
 0.942
qcrB
Menaquinol:cytochrome c oxidoreductase (cytochrome b subunit).
  
 0.941
BL03212
Conservd hypothetical protein.
  
 0.941
qcrC
Menaquinol:cytochrome c oxidoreductase (cytochrome b/c subunit); Component of the menaquinol-cytochrome c reductase complex.
  
 0.941
BL02059
Putative oxidoreductase.
  
 0.923
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.