STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araA2L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose. (474 aa)    
Predicted Functional Partners:
araB
L-ribulokinase.
 
 
 0.980
BL01183
L-ribulose-5-phosphate 4-epimerase.
 
 
 0.954
BL01184
Sugar kinase, possible xylulose kinase.
 
 
 0.928
araD
L-ribulose-5-phosphate 4-epimerase.
 
 
 0.920
abfA
Glycoside Hydrolase Family 51.
 
 
 0.757
BL01178
Transcriptional regulator (LacI family).
 
   
 0.639
blaI
Putative beta-lactamase repressor protein.
      
 0.613
pucH
Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.
      
 0.601
ywtG
Sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
     0.573
glsA
Glutaminase; Belongs to the glutaminase family.
      
 0.560
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.