Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BL01183L-ribulose-5-phosphate 4-epimerase. (231 aa)    
Predicted Functional Partners:
araB
L-ribulokinase.
 
 
 0.987
xylB
Xylulose kinase.
 
 
 0.946
araA2
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.945
BL01184
Sugar kinase, possible xylulose kinase.
 
  
 0.922
rpe
Ribulose-5-phosphate 3-epimerase Rpe; Belongs to the ribulose-phosphate 3-epimerase family.
   
 
 0.913
araD
L-ribulose-5-phosphate 4-epimerase.
  
  
 
0.902
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
 
  
 0.867
BL01698
Putative ATP/GTP-binding protein.
   
    0.746
BL00250
Putative Glycerol dehydrogenase.
  
  
 0.604
araM
AraM; Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1- phosphate (G1P). The G1P thus generated is probably used for the synthesis of phosphoglycerolipids in Gram-positive bacterial species. Belongs to the glycerol-1-phosphate dehydrogenase family.
  
  
 0.604
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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