STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yeaCYeaC. (320 aa)    
Predicted Functional Partners:
yeaD
Conserved protein YeaD.
 
  
 0.962
yebA
Transglutaminase-like enzymes, putative cysteine protease YebA.
 
  
 0.955
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
       0.545
yeaB
Probable cation efflux system membrane protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
  
  
 0.531
speA
Arginine decarboxylase.
   
   0.497
yaaO
Putative Orn/Lys/Arg decarboxylase, C-terminal YaaO; Probable lysine decarboxylase.
   
   0.497
yojO
Von Willebrand factor, type A domain containing protein.
  
  
 0.477
yabS
YabS; Conserved hypothetical containing domain similar to von Willebrand factor,type A.
  
 
 0.460
cinA
Competence-damage inducible protein; Belongs to the CinA family.
 
   
 0.422
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.