STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BL01194Conserved hypothetical protein; Molecular Function: cysteine-type endopeptidase activity, Biological Process: proteolysis and peptidolysis. (141 aa)    
Predicted Functional Partners:
BL05058
Hypothetical protein.
 
   
 0.873
BL05057
Hypothetical protein.
     
 0.825
BL02060
Metallo-beta-lactamase/rhodanese-like domain protein.
 
 
  0.784
yrkH
Conserved protein YrkH.
  
 
  0.756
serA
Phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.739
yraH
Glyoxalase I.
  
 
 0.726
trpA
Tryptophan synthase (alpha subunit); The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
    
  0.569
ftsW
Cell-division protein; Belongs to the SEDS family.
      
 0.565
ytbE
Aldo/keto reductase YtbE.
  
 
  0.533
yvgN
Putative 2,5-diketo-D-gluconic acid reductase YvgN.
  
 
  0.533
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.