STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tepATranslocation-enhancing protein. (248 aa)    
Predicted Functional Partners:
BL01205
Hypothetical protein.
  
  
 0.953
clpX
ATP-dependent Clp protease ATP-binding subunit (class III heat-shock protein); ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
  
 0.923
clpC
Class III stress response-related ATPase; Belongs to the ClpA/ClpB family.
   
 
 0.830
clpE
ATP-dependent Clp protease-like (class III stress gene) ClpE; Belongs to the ClpA/ClpB family.
   
 
 0.830
ylmC
ylmCDEF operon involved in sythesis of Fe-citrate transport system-RamB.
 
   
 0.817
ylzA
Conserved hypothetical protein; Belongs to the RemA family.
 
   
 0.772
ytaF
Conserved membrane protein YtaF; Probably functions as a manganese efflux pump.
  
   
 0.766
spoIIR
SpoIIR.
  
     0.765
spoIIIAA
SpoIIIAA.
  
     0.760
spoIIIAD
SpoIIIAD.
  
     0.757
Your Current Organism:
Bacillus licheniformis
NCBI taxonomy Id: 279010
Other names: B. licheniformis DSM 13 = ATCC 14580, Bacillus licheniformis ATCC 14580, Bacillus licheniformis ATCC 14580 = DSM 13, Bacillus licheniformis DSM 13, Bacillus licheniformis DSM 13 = ATCC 14580
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.