Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| mlpA | ymxH | BL01215 | BL01214 | Peptidase; Belongs to the peptidase M16 family. | Hypothetical protein. | 0.677 |
| spoIIGA | spoIIIAA | BL02254 | BL01540 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | SpoIIIAA. | 0.765 |
| spoIIGA | spoIIIAD | BL02254 | BL01537 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | SpoIIIAD. | 0.766 |
| spoIIGA | spoIIIAE | BL02254 | BL01536 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | SpoIIIAE. | 0.780 |
| spoIIGA | spoIIIAG | BL02254 | BL01534 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | SpoIIIAG. | 0.783 |
| spoIIGA | spoIIR | BL02254 | BL03984 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | SpoIIR. | 0.924 |
| spoIIGA | ylbJ | BL02254 | BL03001 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | YlbJ. | 0.801 |
| spoIIGA | ylmC | BL02254 | BL02259 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | ylmCDEF operon involved in sythesis of Fe-citrate transport system-RamB. | 0.750 |
| spoIIGA | ymxH | BL02254 | BL01214 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Hypothetical protein. | 0.679 |
| spoIIGA | yqfC | BL02254 | BL01409 | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | Conserved hypothetical protein YqfC. | 0.759 |
| spoIIIAA | spoIIGA | BL01540 | BL02254 | SpoIIIAA. | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.765 |
| spoIIIAA | spoIIIAD | BL01540 | BL01537 | SpoIIIAA. | SpoIIIAD. | 0.949 |
| spoIIIAA | spoIIIAE | BL01540 | BL01536 | SpoIIIAA. | SpoIIIAE. | 0.977 |
| spoIIIAA | spoIIIAG | BL01540 | BL01534 | SpoIIIAA. | SpoIIIAG. | 0.987 |
| spoIIIAA | spoIIR | BL01540 | BL03984 | SpoIIIAA. | SpoIIR. | 0.813 |
| spoIIIAA | ylbJ | BL01540 | BL03001 | SpoIIIAA. | YlbJ. | 0.761 |
| spoIIIAA | ylmC | BL01540 | BL02259 | SpoIIIAA. | ylmCDEF operon involved in sythesis of Fe-citrate transport system-RamB. | 0.764 |
| spoIIIAA | ymxH | BL01540 | BL01214 | SpoIIIAA. | Hypothetical protein. | 0.664 |
| spoIIIAA | yqfC | BL01540 | BL01409 | SpoIIIAA. | Conserved hypothetical protein YqfC. | 0.776 |
| spoIIIAD | spoIIGA | BL01537 | BL02254 | SpoIIIAD. | Protease SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. | 0.766 |
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